Publications
1. Sawler J, Stout JM, Gardner KM, Hudson D, Vidmar J, Butler L, Page JE & Myles S. The genetic structure of cannabis. Accepted by PLoS One.
2. Purves R, Ambrose SJ, Clark SM, Stout JM, Page JE. (2015) Separation of isomeric short-chain acyl-CoAs in plant matrices using ultra-performance liquid chromatography coupled with tandem mass spectrometry. Journal of Chromatography B. 980(1): 1-7. PMID 25553535.
3. Xiao M, Zhang Y, Chen X, Lee E-J, Barber C, Chakrabarty R, Desgagne-Penix I, Kim Y-B, Liu E, MacNevin G, Masada-Atsumi S, Reed M, Stout JM, Zerbe P, Zhang Y, Bohlmann J, Covello PS, De Luca V, Page JE, Ro D-K, Martin VJJ, Facchini PJ, and Sensen CW. (2013) Transcriptome analysis based on next-generation sequencing of non-model plants producing specialized metabolites of biotechnological interest. Journal of Biotechnology. 166(3): 122-134. PMID 23602801.
4. Gagne SJ, Stout JM, Liu E, Boubakir Z, Clark SM and Page JE. (2012) Identification of olivetolic acid cyclase from Cannabis sativa reveals a unique catalytic route to plant polyketides. Proceedings of the National Academy of Science. 109(31): 12881-12886. PMID 22802619.
5. Stout JM, Boubakir Z, Ambrose S, Purves R, Page J. (2012) The hexanoyl-CoA precursor for cannabinoid biosynthesis is formed by an acyl-activating enzyme in trichomes of Cannabis sativa. The Plant Journal. 71(3): 353-65. PMID 22353623. Cover photograph and highlighted paper.
6. Bonazitz D, Soltau WL, Blatchley MR, Powers BL, Hurlock AK, Seals LA, Weng JK, Stout JM, and Chapple C. (2012) REF4 and RFR1, subunits of the transcriptional coregulatory complex mediator, are required for phenylpropanoid homeostasis in Arabidopsis. The Journal of Biological Chemistry. 287: 5434-5445. PMID 22167189.
7. van Bakel H, Stout JM, Cote AG, Tallon C, Sharpe AG, Hughes TR, Page JE. (2011) The draft genome and transcriptome of Cannabis sativa. Genome Biology. 12: R102. Highly accessed manuscript.
8. Shilmiller AL, Stout J, Weng JK, Humphries J, Ruegger MO, Chapple C. (2009) Mutations in the Cinnamate 4-hydroxylase gene impact metabolism, growth and development in Arabidopsis. The Plant Journal. 60: 771-782. PMID 19682296. Note: Schilmiller and Stout are co-first authors.
9. Stout J, Romero-Severson E, Ruegger M, Chapple C. (2008) Semidominant mutations in Reduced Epidermal Fluorescence 4 reduce phenylpropanoid content in Arabidopsis. Genetics. 178: 2237-2251. PMID 18430946.
10. Weng JK, Lu X, Stout J, and C Chapple. (2008). Independent origins of syringyl lignin in vascular plants. Proceedings of the National Academy of Science. 105(22): 7887-92. PMID 18505841.
11. Sinlapadech T, Stout J, Ruegger MO, Deak M, Chapple C. (2007) The hyper-fluorescent trichome phenotype of the brt1 mutant of Arabidopsis is the result of a defect in a sinapic acid: UDPG glucosyltransferase. The Plant Journal. 49: 655-668. PMID 17217457.
12. Stout J, Chapple C.(2004) The phenylpropanoid pathway in Arabidopsis: Lessons learned from mutants in sinapate ester biosynthesis. Recent Advances in Phytochemistry. 38: 39-68. (Review)
13. Woram RA, McGowan C, Stout J, Gharbi K, Ferguson MM, Hoyheim B, Davidson EA, Davidson WS, Rexroad C, Danzmann RG. (2004) A genetic linkage map for Arctic char (Salvelinus alpinus): Evidence for higher recombination rates and segregation distortion in hybrid versus pure strain mapping parents. Genome. 47: 304-315. PMID 15060583.
2. Purves R, Ambrose SJ, Clark SM, Stout JM, Page JE. (2015) Separation of isomeric short-chain acyl-CoAs in plant matrices using ultra-performance liquid chromatography coupled with tandem mass spectrometry. Journal of Chromatography B. 980(1): 1-7. PMID 25553535.
3. Xiao M, Zhang Y, Chen X, Lee E-J, Barber C, Chakrabarty R, Desgagne-Penix I, Kim Y-B, Liu E, MacNevin G, Masada-Atsumi S, Reed M, Stout JM, Zerbe P, Zhang Y, Bohlmann J, Covello PS, De Luca V, Page JE, Ro D-K, Martin VJJ, Facchini PJ, and Sensen CW. (2013) Transcriptome analysis based on next-generation sequencing of non-model plants producing specialized metabolites of biotechnological interest. Journal of Biotechnology. 166(3): 122-134. PMID 23602801.
4. Gagne SJ, Stout JM, Liu E, Boubakir Z, Clark SM and Page JE. (2012) Identification of olivetolic acid cyclase from Cannabis sativa reveals a unique catalytic route to plant polyketides. Proceedings of the National Academy of Science. 109(31): 12881-12886. PMID 22802619.
5. Stout JM, Boubakir Z, Ambrose S, Purves R, Page J. (2012) The hexanoyl-CoA precursor for cannabinoid biosynthesis is formed by an acyl-activating enzyme in trichomes of Cannabis sativa. The Plant Journal. 71(3): 353-65. PMID 22353623. Cover photograph and highlighted paper.
6. Bonazitz D, Soltau WL, Blatchley MR, Powers BL, Hurlock AK, Seals LA, Weng JK, Stout JM, and Chapple C. (2012) REF4 and RFR1, subunits of the transcriptional coregulatory complex mediator, are required for phenylpropanoid homeostasis in Arabidopsis. The Journal of Biological Chemistry. 287: 5434-5445. PMID 22167189.
7. van Bakel H, Stout JM, Cote AG, Tallon C, Sharpe AG, Hughes TR, Page JE. (2011) The draft genome and transcriptome of Cannabis sativa. Genome Biology. 12: R102. Highly accessed manuscript.
8. Shilmiller AL, Stout J, Weng JK, Humphries J, Ruegger MO, Chapple C. (2009) Mutations in the Cinnamate 4-hydroxylase gene impact metabolism, growth and development in Arabidopsis. The Plant Journal. 60: 771-782. PMID 19682296. Note: Schilmiller and Stout are co-first authors.
9. Stout J, Romero-Severson E, Ruegger M, Chapple C. (2008) Semidominant mutations in Reduced Epidermal Fluorescence 4 reduce phenylpropanoid content in Arabidopsis. Genetics. 178: 2237-2251. PMID 18430946.
10. Weng JK, Lu X, Stout J, and C Chapple. (2008). Independent origins of syringyl lignin in vascular plants. Proceedings of the National Academy of Science. 105(22): 7887-92. PMID 18505841.
11. Sinlapadech T, Stout J, Ruegger MO, Deak M, Chapple C. (2007) The hyper-fluorescent trichome phenotype of the brt1 mutant of Arabidopsis is the result of a defect in a sinapic acid: UDPG glucosyltransferase. The Plant Journal. 49: 655-668. PMID 17217457.
12. Stout J, Chapple C.(2004) The phenylpropanoid pathway in Arabidopsis: Lessons learned from mutants in sinapate ester biosynthesis. Recent Advances in Phytochemistry. 38: 39-68. (Review)
13. Woram RA, McGowan C, Stout J, Gharbi K, Ferguson MM, Hoyheim B, Davidson EA, Davidson WS, Rexroad C, Danzmann RG. (2004) A genetic linkage map for Arctic char (Salvelinus alpinus): Evidence for higher recombination rates and segregation distortion in hybrid versus pure strain mapping parents. Genome. 47: 304-315. PMID 15060583.